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Termini: Linker:

Sequence Size: 1800base

8_1792


MS Match: 
U A U C U G G U U G A U C C U G C C A G U A G U C A U A U G C U U G U C U C A A A G A U U A A G C C A U G C A U G U C U A A G U A U A A G C A A U U U A U A C A G U G A A A C U G C G A A U G G C U C A U U A A A U C A G U U A U C G U U U A U U U G A U A G U U C C U U U A C U A C A U G G U A U A A C U G U G G U A A U U C U A G A G C U A A U A C A U G C U U A A A A U C U C G A C C C U U U G G A A G A G A U G U A U U U A U U A G A U A A A A A A U C A A U G U C U U C G G A C U C U U U G A U G A U U C A U A A U A A C U U U U C G A A U C G C A U G G C C U U G U G C U G G C G A U G G U U C A U U C A A A U U U C U G C C C U A U C A A C U U U C G A U G G U A G G A U A G U G G C C U A C C A U G G U U U C A A C G G G U A A C G G G G A A U A A G G G U U C G A U U C C G G A G A G G G A G C C U G A G A A A C G G C U A C C A C A U C C A A G G A A G G C A G C A G G C G C G C A A A U U A C C C A A U C C U A A U U C A G G G A G G U A G U G A C A A U A A A U A A C G A U A C A G G G C C C A U U C G G G U C U U G U A A U U G G A A U G A G U A C A A U G U A A A U A C C U U A A C G A G G A A C A A U U G G A G G G C A A G U C U G G U G C C A G C A G C C G C G G U A A U U C C A G C U C C A A U A G C G U A U A U U A A A G U U G U U G C A G U U A A A A A G C U C G U A G U U G A A C U U U G G G C C C G G U U G G C C G G U C C G A U U U U U U C G U G U A C U G G A U U U C C A A C G G G G C C U U U C C U U C U G G C U A A C C U U G A G U C C U U G U G G C U C U U G G C G A A C C A G G A C U U U U A C U U U G A A A A A A U U A G A G U G U U C A A A G C A G G C G U A U U G C U C G A A U A U A U U A G C A U G G A A U A A U A G A A U A G G A C G U U U G G U U C U A U U U U G U U G G U U U C U A G G A C C A U C G U A A U G A U U A A U A G G G A C G G U C G G G G G C A U C A G U A U U C A A U U G U C A G A G G U G A A A U U C U U G G A U U U A U U G A A G A C U A A C U A C U G C G A A A G C A U U U G C C A A G G A C G U U U U C A U U A A U C A A G A A C G A A A G U U A G G G G A U C G A A G A U G A U C A G A U A C C G U C G U A G U C U U A A C C A U A A A C U A U G C C G A C U A G G G A U C G G G U G G U G U U U U U U U A A U G A C C C A C U C G G C A C C U U A C G A G A A A U C A A A G U C U U U G G G U U C U G G G G G G A G U A U G G U C G C A A G G C U G A A A C U U A A A G G A A U U G A C G G A A G G G C A C C A C C A G G A G U G G A G C C U G C G G C U U A A U U U G A C U C A A C A C G G G G A A A C U C A C C A G G U C C A G A C A C A A U A A G G A U U G A C A G A U U G A G A G C U C U U U C U U G A U U U U G U G G G U G G U G G U G C A U G G C C G U U C U U A G U U G G U G G A G U G A U U U G U C U G C U U A A U U G C G A U A A C G A A C G A G A C C U U A A C C U A C U A A A U A G U G G U G C U A G C A U U U G C U G G U U A U C C A C U U C U U A G A G G G A C U A U C G G U U U C A A G C C G A U G G A A G U U U G A G G C A A U A A C A G G U C U G U G A U G C C C U U A G A C G U U C U G G G C C G C A C G C G C G C U A C A C U G A C G G A G C C A G C G A G U C U A A C C U U G G C C G A G A G G U C U U G G U A A U C U U G U G A A A C U C C G U C G U G C U G G G G A U A G A G C A U U G U A A U U A U U G C U C U U C A A C G A G G A A U U C C U A G U A A G C G C A A G U C A U C A G C U U G C G U U G A U U A C G U C C C U G C C C U U U G U A C A C A C C G C C C G U C G C U A G U A C C G A U U G A A U G G C U U A G U G A G G C C U C A G G A U C U G C U U A G A G A A G G G G G C A A C U C C A U C U C A G A G C G G A G A A U U U G G A C A A A C U U G G U C A U U U A G A G G A A C U A A A A G U C G U A A C A A G G U U U C C G U A G G U G A A C C U G C G G A A G G A U C A U U A
Identification Summary
RNADescriptionScoreCoverageMatchedSumMatched PositionsMatched Sequences
0_8_1792Sce_18S_rRNA126.032.5443288_10, 11_16, 17_20, 21_23, 31_34, 43_48, 49_53, 82_83, 92_95, 124_127, 152_153, 164_165, 197_199, 200_201, 202_204, 244_246, 275_279, 280_281, 282_284, 288_290, 323_325, 327_329, 331_334, 335_336, 358_362, 366_371, 378_383, 385_386, 387_388, 391_392, 393_396, 397_398, 420_422, 424_426, 427_429, 460_461, 463_465, 466_467, 499_503, 504_509, 511_514, 515_516, 538_539, 550_551, 554_557, 558_561, 563_564, 565_568, 569_571, 572_574, 608_610, 611_613, 614_616, 629_631, 632_634, 635_641, 644_647, 649_651, 653_655, 670_671, 713_714, 715_720, 721_722, 762_763, 764_765, 773_775, 817_819, 820_823, 835_837, 869_871, 880_885, 896_899, 900_901, 903_904, 923_925, 939_942, 943_948, 949_953, 955_957, 973_976, 977_980, 988_991, 992_994, 995_997, 998_1002, 1012_1014, 1033_1035, 1036_1040, 1043_1046, 1049_1050, 1052_1053, 1084_1085, 1103_1107, 1113_1114, 1123_1126, 1128_1130, 1147_1149, 1151_1153, 1166_1167, 1168_1169, 1171_1172, 1173_1176, 1230_1233, 1234_1237, 1238_1241, 1242_1243, 1244_1245, 1262_1263, 1266_1267, 1269_1270, 1272_1273, 1279_1281, 1289_1291, 1293_1294, 1296_1297, 1298_1299, 1300_1304, 1305_1308, 1325_1328, 1329_1330, 1350_1351, 1353_1354, 1359_1364, 1365_1367, 1384_1385, 1403_1405, 1406_1408, 1410_1412, 1413_1416, 1417_1418, 1430_1433, 1434_1435, 1436_1438, 1446_1448, 1449_1453, 1456_1458, 1475_1477, 1479_1480, 1481_1484, 1487_1488, 1500_1502, 1503_1504, 1505_1506, 1508_1512, 1522_1523, 1535_1536, 1537_1539, 1543_1546, 1547_1548, 1549_1553, 1573_1574, 1585_1588, 1591_1594, 1602_1605, 1608_1610, 1639_1642, 1655_1658, 1659_1662, 1669_1670, 1671_1672, 1681_1685, 1691_1692, 1693_1695, 1714_1715, 1719_1720, 1746_1747, 1775_1777, 1779_1780, 1790_1792OH_UUG_p, OH_AUCCUG_p, OH_CCAG_p, OH_UAG_p, OH_CUUG_p, OH_AUUAAG_p, OH_CCAUG_p, OH_UG_p, OH_AAUG_p, OH_AUAG_p, OH_UG_p, OH_AG_p, OH_AAG_p, OH_AG_p, OH_AUG_p, OH_AUG_p, OH_CCUUG_p, OH_UG_p, OH_CUG_p, OH_AUG_p, OH_AUG_p, OH_UAG_p, OH_AUAG_p, OH_UG_p, OH_UAACG_p, OH_AAUAAG_p, OH_AUUCCG_p, OH_AG_p, OH_AG_p, OH_AG_p, OH_CCUG_p, OH_AG_p, OH_AAG_p, OH_CAG_p, OH_CAG_p, OH_AG_p, OH_UAG_p, OH_UG_p, OH_UCUUG_p, OH_UAAUUG_p, OH_AAUG_p, OH_AG_p, OH_AG_p, OH_AG_p, OH_CAAG_p, OH_UCUG_p, OH_UG_p, OH_CCAG_p, OH_CAG_p, OH_CCG_p, OH_UUG_p, OH_UUG_p, OH_CAG_p, OH_UAG_p, OH_UUG_p, OH_AACUUUG_p, OH_CCCG_p, OH_UUG_p, OH_CCG_p, OH_UG_p, OH_AG_p, OH_UCCUUG_p, OH_UG_p, OH_AG_p, OH_UG_p, OH_CAG_p, OH_ACG_p, OH_UUUG_p, OH_UUG_p, OH_ACG_p, OH_CAUCAG_p, OH_UCAG_p, OH_AG_p, OH_UG_p, OH_AAG_p, OH_AAAG_p, OH_CAUUUG_p, OH_CCAAG_p, OH_ACG_p, OH_AACG_p, OH_AAAG_p, OH_AUCG_p, OH_AAG_p, OH_AUG_p, OH_AUCAG_p, OH_UAG_p, OH_CCG_p, OH_ACUAG_p, OH_AUCG_p, OH_UG_p, OH_UG_p, OH_AG_p, OH_UUCUG_p, OH_AG_p, OH_CAAG_p, OH_CUG_p, OH_ACG_p, OH_AAG_p, OH_AG_p, OH_UG_p, OH_AG_p, OH_CCUG_p, OH_AUUG_p, OH_ACAG_p, OH_AUUG_p, OH_AG_p, OH_AG_p, OH_UG_p, OH_UG_p, OH_UG_p, OH_UG_p, OH_CCG_p, OH_UUG_p, OH_UG_p, OH_AG_p, OH_UG_p, OH_AUUUG_p, OH_UCUG_p, OH_AACG_p, OH_AG_p, OH_UG_p, OH_UG_p, OH_CAUUUG_p, OH_CUG_p, OH_AG_p, OH_CCG_p, OH_AUG_p, OH_AAG_p, OH_UUUG_p, OH_AG_p, OH_UCUG_p, OH_UG_p, OH_AUG_p, OH_ACG_p, OH_UUCUG_p, OH_CCG_p, OH_ACG_p, OH_AG_p, OH_CCAG_p, OH_AG_p, OH_CCG_p, OH_AG_p, OH_AG_p, OH_UCUUG_p, OH_UG_p, OH_UG_p, OH_CUG_p, OH_AUAG_p, OH_AG_p, OH_CAUUG_p, OH_AG_p, OH_UAAG_p, OH_CAAG_p, OH_CUUG_p, OH_UUG_p, OH_CCCG_p, OH_AUUG_p, OH_AAUG_p, OH_UG_p, OH_AG_p, OH_AUCUG_p, OH_AG_p, OH_AAG_p, OH_AG_p, OH_AG_p, OH_AG_p, OH_UAG_p, OH_UG_p, OH_AAG_p

Matched Nucleotide List    

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RIKEN Center for Sustainable Resource Science