Ariadne: Results view


Search parameter
Nucleotide mapping

Score histgram

Identification summary

Oligonucleotide-RNA matrix

MS/MS ion search

Matched nucleotide list(overall)


Search parameter

search_ID: 20170818105937.dat
mgf_file: synthetic_siRNA_Waters_Q-Tof_MaxEnt3.mgf
database: siRNA(UUCUGUAAUCUCUUGUCUA(dT)(dT)).fasta

Enzyme_pattern_file: noEnzyme.txt
max_mods: 0
max_missed_cleavages: 0
fp: 5pOH
tp: OH3p
Mass_tolerance: 500
MS2_tolerance: 20
mass_table: default
base_number: 3
reject_length_for_mapping: 3
polarity: negative

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Nucleotide mapping

Score histgram


Identification summary
RNA desc score matched sum matched_positions matched_sequences
1_0 siRNA(UUCUGUAAU 0.10 1 1 1_21 UUCUGUAAUCUCUUGUCUAtt

Oligonucleotide-RNA matrix
  RNA 1_0
  rank 1
  score 0.10
  length 21
oligonucleotide q#  
UUCUGUAAUCUCUUGUCUAtt 0 1


MS/MS ion search

Matched nucleotide list(overall)
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RIKEN Center for Sustainable Resource Science