Ariadne: Results view


Search parameter
Nucleotide mapping

Score histgram

Identification summary

Oligonucleotide-RNA matrix

MS/MS ion search

Matched nucleotide list(overall)


Search parameter

search_ID: 20170613141415.dat
mgf_file: 150625_DNA6mix_100fmol_NCE20_spice13.mgf
database: dna6mix.fasta

Enzyme_pattern_file: noEnzyme.txt
max_mods: 0
max_missed_cleavages: 0
fp: 5pOH
tp: P3p
Mass_tolerance: 50
MS2_tolerance: 50
mass_table: default
base_number: 3
reject_length_for_mapping: 3
polarity: negative

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Nucleotide mapping

Score histgram


Identification summary
RNA desc score matched sum matched_positions matched_sequences
1_0 4mer 0.79 1 1 1_4 agct
2_0 5mer 0.79 1 1 1_5 agcta
3_0 7mer 0.79 1 1 1_7 agctagc
4_0 9mer 0.79 1 1 1_9 agctagcta
5_0 11mer 0.79 1 1 1_11 agctagctagc
6_0 13mer 0.79 1 1 1_13 agctagctagcta

Oligonucleotide-RNA matrix
  RNA 1_0 2_0 3_0 4_0 5_0 6_0
  rank 1 1 1 1 1 1
  score 0.79 0.79 0.79 0.79 0.79 0.79
  length 4 5 7 9 11 13
oligonucleotide q#            
agctagctagcta 3,11,21,27,43,45,92 0 0 0 0 0 1
agct 4 1 0 0 0 0 0
agctagcta 2,7,17,26,40,64,66,70,83,131 0 0 0 1 0 0
agcta 1,19 0 1 0 0 0 0
agctagc 0,6,9 0 0 1 0 0 0
agctagctagc 5,38,130 0 0 0 0 1 0


MS/MS ion search

Matched nucleotide list(overall)
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RIKEN Center for Sustainable Resource Science