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Nucleotide mapping

Score histgram

Identification summary

Oligonucleotide-RNA matrix

MS/MS ion search

Matched nucleotide list(overall)

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Nucleotide mapping

Score histgram

Identidication summary
RNAdescscorematchedsummatched_positionmatched_sequences
2_1Sce_25S_rRNA348.4017317132_5, 6_17, 25_30, 42_53, 60_64, 65_74, 77_80, 81_86, 87_91, 105_110, 111_120, 129_136, 149_155, 163_170, 177_183, 184_189, 190_196, 198_202, 221_227, 252_256, 259_264, 278_281, 284_287, 291_297, 305_320, 321_330, 342_345, 348_353, 354_358, 365_368, 372_376, 377_383, 384_388, 395_400, 407_412, 416_419, 427_432, 433_437, 446_450, 453_459, 460_466, 477_483, 484_493, 496_499, 500_505, 506_510, 519_530, 532_535, 539_542, 543_547, 549_552, 569_575, 576_579, 601_604, 618_624, 640_644, 653_658, 669_674, 681_684, 689_701, 709_712, 715_718, 729_733, 734_737, 743_750, 755_760, 775_779, 782_785, 788_792, 806_809, 839_842, 871_875, 881_887, 888_891, 913_916, 917_924, 925_934, 942_947, 965_968, 979_984, 995_999, 1002_1005, 1006_1010, 1014_1018, 1025_1029, 1030_1035, 1060_1063, 1067_1072, 1073_1083, 1084_1087, 1091_1097, 1098_1101, 1128_1131, 1135_1139, 1153_1157, 1158_1161, 1167_1171, 1179_1186, 1187_1194, 1195_1206, 1214_1222, 1223_1226, 1223_1229, 1238_1242, 1251_1256, 1269_1281, 1286_1289, 1290_1295, 1296_1300, 1314_1319, 1341_1344, 1350_1354, 1358_1362, 1384_1387, 1396_1400, 1405_1408, 1418_1421, 1422_1429, 1423_1429, 1467_1473, 1489_1492, 1494_1500, 1501_1507, 1529_1536, 1548_1552, 1553_1560, 1566_1573, 1578_1586, 1587_1590, 1593_1598, 1600_1604, 1605_1610, 1619_1623, 1625_1634, 1636_1640, 1647_1650, 1669_1673, 1701_1712, 1720_1727, 1737_1743, 1755_1758, 1759_1766, 1771_1775, 1781_1784, 1797_1807, 1818_1825, 1826_1829, 1839_1845, 1853_1860, 1864_1868, 1869_1875, 1879_1882, 1893_1897, 1915_1919, 1920_1927, 1930_1934, 1936_1939, 1941_1947, 1964_1968, 1970_1973, 1988_1991, 1999_2002, 2009_2012, 2013_2017, 2026_2033, 2038_2042, 2053_2057, 2063_2069, 2080_2083, 2084_2095, 2096_2105, 2106_2110, 2117_2121, 2151_2155, 2162_2165, 2166_2169, 2181_2185, 2202_2206, 2207_2210, 2211_2216, 2222_2234, 2284_2288, 2312_2315, 2326_2335, 2356_2364, 2365_2369, 2372_2375, 2378_2381, 2386_2391, 2397_2400, 2404_2409, 2415_2418, 2426_2429, 2430_2435, 2458_2463, 2478_2481, 2484_2503, 2504_2522, 2535_2549, 2550_2555, 2556_2563, 2565_2573, 2580_2584, 2593_2598, 2599_2602, 2611_2614, 2640_2645, 2652_2658, 2664_2669, 2673_2677, 2678_2687, 2691_2698, 2701_2706, 2707_2714, 2746_2749, 2755_2761, 2762_2770, 2771_2777, 2797_2800, 2801_2805, 2806_2814, 2817_2823, 2825_2828, 2851_2856, 2857_2863, 2902_2907, 2909_2912, 2919_2922, 2940_2943, 2969_2972, 2978_2990, 2994_2997, 2998_3003, 3004_3009, 3010_3015, 3016_3022, 3032_3036, 3037_3044, 3046_3052, 3054_3059, 3066_3069, 3070_3074, 3076_3080, 3089_3098, 3103_3108, 3113_3116, 3117_3124, 3125_3128, 3129_3136, 3141_3144, 3150_3158, 3178_3182, 3183_3188, 3192_3197, 3209_3216, 3225_3229, 3233_3238, 3243_3246, 3248_3252, 3257_3260, 3272_3276, 3277_3284, 3292_3303, 3310_3315, 3319_3325, 3334_3337, 3349_3353, 3357_3361, 3362_3366, 3372_3377, 3378_3383, 3387_3390, 3391_3395UUUG, ACCUCAAAUCAG, UACCCG, CAUAUCAAUAAG, AAAAG, AAACCAACCG, AUUG, CCUUAG, UAACG, CAAAAG, CUCAAAUUUG, UACCUUCG, UAAUUUG, CAACUUUG, UUCCUUG, UCUAUG, UUCCUUG, AACAG, AAUCCCG, UAAAG, CCUUCG, UUUG, AAUG, CUCUAAG, UAAAUUCCAUCUAAAG, CUAAAUAUUG, AUAG, AACAAG, UACAG, AAAG, AAAAG, AACUUUG, AAAAG, AAAAAG, AAAUUG, AAAG, CAUUUG, AUCAG, UUUUG, CCCUCUG, CUCCUUG, AAUCUCG, CAUUUCACUG, CCAG, CAUCAG, UUUUG, AUAAAUCCAUAG, AAUG, CUUG, CCUCG, UAAG, AAUACUG, CCAG, UAAG, CAUAAUG, UCUUG, ACCAAG, UCUAUG, UUUG, UAAAACCCAUACG, AAAG, AACG, CCUCG, CAAG, CACAAUCG, AUCCUG, AUUUG, UAAG, CAUAG, AAAG, CCAG, UUCUG, CAAAUCG, AUCG, AAAG, ACUAAUCG, AACCAUCUAG, UUCCUG, AUAG, UAUCAG, UAAAG, AAUG, AUUAG, UUCCG, AAAUG, ACCUUG, UAAG, UCCUUG, UUACUUAAUUG, AACG, ACAUUUG, AAUG, UAAG, AACUG, AACCG, AACG, UUAAG, AAUACACG, CUCAUCAG, ACACCACAAAAG, UUCAUCUAG, ACAG, ACAGCCG, CCAUG, AAUCCG, UAACAACUCACCG, AAUG, AACUAG, CCCUG, CUCAAG, UCAG, AUAUG, CCCUG, UCAG, CCUAG, UAAG, AACG, GCCUCUAG, CCUCUAG, AACUUUG, AAAG, UUCCACG, UCAACAG, AUCCUAAG, CUCCG, UUUCAAAG, AUUUUAUG, CCACCAUCG, AAAG, AAUCCG, UUAAG, AUUCCG, AUAUG, AUUCUUCACG, UAACG, AAUG, CCCUG, CUUAUCACCCCG, UUUAUCCG, UCUUAUG, CCAG, CACCUUUG, CUCCG, CUUG, AAAAUCCACAG, UUUUCAUG, CCAG, AUAACCG, UCUCCAAG, AACAG, CCUCUAG, AUAG, AUAAG, AUCCG, UAACUUCG, AUAAG, AUUG, CUCUAAG, CCUUG, UCAG, CUUG, CUUG, CUUG, CUCUG, ACUACUUG, CCUUG, CCUUG, UCUCUUG, CUUG, CUACAAUUAACG, AUCAACUUAG, AACUG, ACAAG, CAUUG, UCAG, AAAG, CAAUG, CUCUG, AAUG, UCAAAG, AAAUUCAACCAAG, CCUCG, AAUG, AUUCCCACUG, AAACCACAG, CCAAG, AACG, CUUG, AAUCAG, AAAG, ACCCUG, CUUG, UUUG, ACAUUG, AAUAAG, CCAG, AAAUACCACUACCUUUAUAG, UUUCUUUACUUAUUCAAUG, AAUUCAUUUUCCACG, UUCUAG, CAUUCAAG, UCCCAUUCG, AUCCG, ACAUUG, UCAG, UUUG, AUAACG, UCCUAAG, CUCAUG, AACAG, AAAUCUCCAG, AACAAAAG, UAAAAG, CCCCCUUG, AAAG, CCUAUCG, AUCCUUUAG, UCCCUCG, CCAG, AAAAG, UUACCACAG, AUAACUG, CUUG, ACAUUG, CUUUUUG, AAUUCG, UAAG, AUUG, AACG, ACAG, UUUUACCCUACUG, AAUG, UUACCG, CAAUAG, UAAUUG, AACUUAG, AACAG, UUCAUUCG, AUAAUUG, UUUUUG, UCUG, AUCAG, CAUUG, CUACCAUCCG, AUUAUG, AACG, CCUCUAAG, UCAG, AAUCCAUG, AACG, AUUUCUUUG, AUACG, AAUAAG, UCCUUG, AACCAUAG, CAACG, CACUUG, AAAG, CCUUG, CUUG, CAAUG, UCAUUUUG, AUAAAUCAUUUG, ACUUAG, UACAACG, UAAG, CCUUG, UUACG, AUCUG, AUUAAG, CCUUUG, UCUG, AUUUG
1_3Sce_18S_rRNA19.7952011_16, 17_20, 31_34, 43_48, 49_53AUCCUG, CCAG, CUUG, AUUAAG, CCAUG
1_223Sce_18S_rRNA18.33634939_942, 943_948, 949_953, 973_976, 977_980, 988_991, 998_1002AAAG, CAUUUG, CCAAG, AACG, AAAG, AUCG, AUCAG
1_327Sce_18S_rRNA16.924141300_1304, 1305_1308, 1319_1324, 1325_1328AUUUG, UCUG, AUAACG, AACG
1_111Sce_18S_rRNA14.62639499_503, 504_509, 511_514, 554_557, 558_561, 565_568UCUUG, UAAUUG, AAUG, CAAG, UCUG, CCAG
1_69Sce_18S_rRNA11.70315358_362, 366_371, 378_383UAACG, AAUAAG, AUUCCG
1_394Sce_18S_rRNA11.205311543_1546, 1549_1553, 1585_1588, 1591_1594, 1602_1605AUAG, CAUUG, UAAG, CAAG, CUUG
1_363Sce_18S_rRNA9.96281449_1453, 1456_1462UUCUG, CCGCACG
1_302Sce_18S_rRNA9.67251230_1233, 1234_1237, 1238_1241AUUG, ACAG, AUUG
1_167Sce_18S_rRNA9.5826715_720, 724_729UCCUUG, CUCUUG
1_417Sce_18S_rRNA9.29231655_1658, 1659_1662AUUG, AAUG
1_211Sce_18S_rRNA8.9226880_885, 896_899CAUCAG, UCAG
1_426Sce_18S_rRNA6.34111681_1685AUCUG
1_145Sce_18S_rRNA5.9311635_641AACUUUG
1_247Sce_18S_rRNA5.93111043_1046AUCG
1_262Sce_18S_rRNA5.93111103_1107UUCUG
1_339Sce_18S_rRNA5.93111359_1364CAUUUG
1_383Sce_18S_rRNA5.93111508_1512UCUUG
1_272Sce_18S_rRNA5.65111123_1126CAAG
1_353Sce_18S_rRNA5.512111413_1416, 1430_1433UUUG, UCUG
1_23Sce_18S_rRNA5.2411124_127AUAG
1_48Sce_18S_rRNA5.2411275_279CCUUG
1_61Sce_18S_rRNA5.2411331_334AUAG
1_192Sce_18S_rRNA5.0911820_823UUUG
1_374Sce_18S_rRNA4.73111481_1484CCAG
1_18Sce_18S_rRNA4.551192_95AAUG

Oligonucleotide-RNA matrix
 RNA2_11_31_2231_3271_1111_691_3941_3631_3021_1671_4171_2111_4261_1451_2471_2621_3391_3831_2721_3531_231_481_611_1921_3741_18
 rank1234567891011121314141414141920212121242526
 score348.4019.7918.3316.9214.6211.7011.209.969.679.589.298.926.345.935.935.935.935.935.655.515.245.245.245.094.734.55
 length3394436429702663141215820574565421454444
oligonucleotideq#                          
UUUG1750000000000000000001000100
ACCUCAAAUCAG23610000000000000000000000000
UACCCG12610000000000000000000000000
CAUAUCAAUAAG218,50510000000000000000000000000
AAAAG2240000000000000000000000000
AAACCAACCG257,396,45710000000000000000000000000
AUUG5030000000201000000000000000
CCUUAG11610000000000000000000000000
UAACG3420000100000000000000000000
CAAAAG12410000000000000000000000000
CUCAAAUUUG18210000000000000000000000000
UACCUUCG20210000000000000000000000000
UAAUUUG5910000000000000000000000000
CAACUUUG121,26510000000000000000000000000
UUCCUUG4320000000000000000000000000
UCUAUG3320000000000000000000000000
AACAG25,25940000000000000000000000000
AAUCCCG16010000000000000000000000000
UAAAG4720000000000000000000000000
CCUUCG125,44910000000000000000000000000
AAUG990001000001000000000000001
CUCUAAG26,26720000000000000000000000000
UAAAUUCCAUCUAAAG334,40010000000000000000000000000
CUAAAUAUUG19010000000000000000000000000
AUAG5430000010000000000000101000
AACAAG15410000000000000000000000000
UACAG10710000000000000000000000000
AAAG4110200000000000000000000000
AACUUUG6220000000000001000000000000
AAAAAG13310000000000000000000000000
AAAUUG15910000000000000000000000000
CAUUUG7310100000000000001000000000
AUCAG720100000000000000000000000
UUUUG30,35720000000000000000000000000
CCCUCUG13710000000000000000000000000
CUCCUUG101,377,42610000000000000000000000000
AAUCUCG119,379,45010000000000000000000000000
CAUUUCACUG16610000000000000000000000000
CCAG1671001000000000000000000010
CAUCAG9910000000000100000000000000
AUAAAUCCAUAG189,43710000000000000000000000000
CUUG1,517101000010000000000000000000
CCUCG44,36930000000000000000000000000
UAAG280000010000000000000000000
AAUACUG35,32110000000000000000000000000
CAUAAUG196,22910000000000000000000000000
UCUUG7110001000000000000100000000
ACCAAG18310000000000000000000000000
UAAAACCCAUACG23510000000000000000000000000
AACG1280110000000000000000000000
CAAG15810001010000000000010000000
CACAAUCG20010000000000000000000000000
AUCCUG6611000000000000000000000000
AUUUG8320010000000000000000000000
CAUAG8910000000000000000000000000
UUCUG10810000001000000010000000000
CAAAUCG13210000000000000000000000000
AUCG12210100000000000100000000000
ACUAAUCG22810000000000000000000000000
AACCAUCUAG79,312,52210000000000000000000000000
UUCCUG6910000000000000000000000000
UAUCAG8510000000000000000000000000
AUUAG17910000000000000000000000000
UUCCG7210000000000000000000000000
AAAUG17510000000000000000000000000
ACCUUG7610000000000000000000000000
UCCUUG18,30320000000010000000000000000
UUACUUAAUUG17210000000000000000000000000
ACAUUUG9310000000000000000000000000
AACUG5720000000000000000000000000
AACCG16310000000000000000000000000
UUAAG2020000000000000000000000000
AAUACACG203,29710000000000000000000000000
CUCAUCAG68,18610000000000000000000000000
ACACCACAAAAG24710000000000000000000000000
UUCAUCUAG21910000000000000000000000000
ACAG6520000000100000000000000000
ACAGCCG11010000000000000000000000000
CCAUG10011000000000000000000000000
AAUCCG2920000000000000000000000000
UAACAACUCACCG24510000000000000000000000000
AACUAG13810000000000000000000000000
CCCUG35430000000000000000000000000
CUCAAG9010000000000000000000000000
UCAG1560000000000100000000000000
AUAUG4620000000000000000000000000
CCUAG10610000000000000000000000000
GCCUCUAG201,28610000000000000000000000000
CCUCUAG4120000000000000000000000000
UUCCACG8610000000000000000000000000
UCAACAG8410000000000000000000000000
AUCCUAAG22310000000000000000000000000
CUCCG40,419,56720000000000000000000000000
UUUCAAAG22610000000000000000000000000
AUUUUAUG18410000000000000000000000000
CCACCAUCG204,27810000000000000000000000000
AUUCCG8710000100000000000000000000
AUUCUUCACG16910000000000000000000000000
CUUAUCACCCCG19810000000000000000000000000
UUUAUCCG17610000000000000000000000000
UCUUAUG9110000000000000000000000000
CACCUUUG162,26810000000000000000000000000
AAAAUCCACAG19210000000000000000000000000
UUUUCAUG19110000000000000000000000000
AUAACCG16410000000000000000000000000
UCUCCAAG17310000000000000000000000000
AUAAG5820000000000000000000000000
AUCCG3920000000000000000000000000
UAACUUCG187,27710000000000000000000000000
CCUUG5,24650000000000000000000010000
CUCUG37,37520000000000000000000000000
ACUACUUG17710000000000000000000000000
UCUCUUG7510000000000000000000000000
CUACAAUUAACG21510000000000000000000000000
AUCAACUUAG17110000000000000000000000000
ACAAG14410000000000000000000000000
CAUUG31420000010000000000000000000
CAAUG2420000000000000000000000000
UCAAAG7810000000000000000000000000
AAAUUCAACCAAG211,436,533,571,58310000000000000000000000000
AUUCCCACUG14710000000000000000000000000
AAACCACAG24110000000000000000000000000
CCAAG10510100000000000000000000000
AAUCAG13410000000000000000000000000
ACCCUG12710000000000000000000000000
ACAUUG8,23230000000000000000000000000
AAUAAG6020000100000000000000000000
AAAUACCACUACCUUUAUAG340,547,62210000000000000000000000000
UUUCUUUACUUAUUCAAUG31610000000000000000000000000
AAUUCAUUUUCCACG263,424,473,528,626,63210000000000000000000000000
UUCUAG14510000000000000000000000000
CAUUCAAG23410000000000000000000000000
UCCCAUUCG17410000000000000000000000000
AUAACG11310010000000000000000000000
UCCUAAG26710000000000000000000000000
CUCAUG11210000000000000000000000000
AAAUCUCCAG23910000000000000000000000000
AACAAAAG214,315,43510000000000000000000000000
UAAAAG11810000000000000000000000000
CCCCCUUG221,291,46310000000000000000000000000
CCUAUCG9510000000000000000000000000
AUCCUUUAG20710000000000000000000000000
UCCCUCG104,36510000000000000000000000000
UUACCACAG252,27910000000000000000000000000
AUAACUG14010000000000000000000000000
CUUUUUG15210000000000000000000000000
AAUUCG19410000000000000000000000000
UUUUACCCUACUG21710000000000000000000000000
UUACCG12310000000000000000000000000
CAAUAG8810000000000000000000000000
UAAUUG9710001000000000000000000000
AACUUAG16510000000000000000000000000
UUCAUUCG197,28510000000000000000000000000
AUAAUUG29910000000000000000000000000
UUUUUG7010000000000000000000000000
UCUG5220011000000000000001000000
CUACCAUCCG14610000000000000000000000000
AUUAUG11510000000000000000000000000
CCUCUAAG19510000000000000000000000000
AAUCCAUG224,30210000000000000000000000000
AUUUCUUUG22010000000000000000000000000
AUACG13110000000000000000000000000
AACCAUAG238,30810000000000000000000000000
CAACG13910000000000000000000000000
CACUUG9810000000000000000000000000
UCAUUUUG21310000000000000000000000000
AUAAAUCAUUUG199,45910000000000000000000000000
ACUUAG5310000000000000000000000000
UACAACG15110000000000000000000000000
UUACG10310000000000000000000000000
AUCUG18110000000000010000000000000
AUUAAG14811000000000000000000000000
CCUUUG8210000000000000000000000000
CCGCACG15500000001000000000000000000
CUCUUG30300000000010000000000000000


MS/MS ion search

Select display table  

Matched nucleotide list(overall)

Not hit nucleotide list(overall)