Ariadne: Results view


Search parameter
Nucleotide mapping

Score histgram

Identification summary

Oligonucleotide-RNA matrix

MS/MS ion search

Matched nucleotide list(overall)


Search parameter

search_ID: 20160725132724.dat
mgf_file: 131106hela-miRNA12-27_spice11.mgf
database: H_sapiens_miRNA_var.fasta

Enzyme_pattern_file: noEnzyme.txt
max_mods: 0
max_missed_cleavages: 0
fp: 5pP
tp: OH3p
Mass_tolerance: 5
MS2_tolerance: 20
mass_table: default
base_number: 3
reject_length_for_mapping: 3
polarity: negative

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Nucleotide mapping

Score histgram


Identification summary
RNA desc score matched sum matched_positions matched_sequences
134_0 hsa-let-7a-5p M 9.92 1 1 1_22 UGAGGUAGUAGGUUGUAUAGUU
268_0 hsa-let-7d-5p M 9.92 1 1 1_22 AGAGGUAGUAGGUUGCAUAGUU
285_0 hsa-let-7f-5p M 9.92 1 1 1_22 UGAGGUAGUAGAUUGUAUAGUU
626_0 hsa-miR-365a-3p 9.92 1 1 1_22 UAAUGCCCCUAAAAAUCCUUAU
2193_0 hsa-miR-106b-5p 9.92 1 1 1_21 UAAAGUGCUGACAGUGCAGAU
4921_0 hsa-miR-21-5p M 9.92 1 1 1_23 UAGCUUAUCAGACUGAUGUUGAC
16713_0 hsa-miR-16-5p M 9.92 1 1 1_22 UAGCAGCACGUAAAUAUUGGCG
19875_0 hsa-miR-23a-3p 9.92 1 1 1_22 AUCACAUUGCCAGGGAUUUCCA
26122_0 hsa-miR-98-5p M 9.92 1 1 1_22 UGAGGUAGUAAGUUGUAUUGUU
26484_0 hsa-miR-29b-3p 9.92 1 1 1_23 UAGCACCAUUUGAAAUCAGUGUU
26506_0 hsa-miR-23a-3p 9.92 1 1 1_23 AUCACAUUGCCAGGGAUUUCCAA
29232_0 hsa-miR-21-5p M 9.92 1 1 1_22 UAGCUUAUCAGACUGAUGUUGA
38548_0 hsa-miR-15b-5p 9.92 1 1 1_22 UAGCAGCACAUCAUGGUUUACA
49115_0 hsa-miR-29c-3p 9.92 1 1 1_22 UAGCACCAUUUGAAAUCGGUUA
52075_0 hsa-miR-30c-5p 9.92 1 1 1_24 UGUAAACAUCCUACACUCUCAGCU

Oligonucleotide-RNA matrix
  RNA 134_0 268_0 285_0 626_0 2193_0 4921_0 16713_0 19875_0 26122_0 26484_0 26506_0 29232_0 38548_0 49115_0 52075_0
  rank 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
  score 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92 9.92
  length 22 22 22 22 21 23 22 22 22 23 23 22 22 22 24
oligonucleotide q#                              
UAGCAGCACAUCAUGGUUUACA 83 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
UAGCUUAUCAGACUGAUGUUGAC 16 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
AUCACAUUGCCAGGGAUUUCCA 76 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
UGAGGUAGUAGGUUGUAUAGUU 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGAGGUAGUAGGUUGCAUAGUU 128 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
UGUAAACAUCCUACACUCUCAGCU 143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
UGAGGUAGUAGAUUGUAUAGUU 29 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
AUCACAUUGCCAGGGAUUUCCAA 183 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
UAGCAGCACGUAAAUAUUGGCG 64 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
UAGCACCAUUUGAAAUCAGUGUU 214 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
UGAGGUAGUAAGUUGUAUUGUU 199 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
UAGCACCAUUUGAAAUCGGUUA 40 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
UAGCUUAUCAGACUGAUGUUGA 17 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
UAAUGCCCCUAAAAAUCCUUAU 94 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
UAAAGUGCUGACAGUGCAGAU 114 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0


MS/MS ion search

Matched nucleotide list(overall)
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